BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F03SP1|AL425563
(946 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1671 1853 0.0
3x_Contig1746 159 1e-38
3x_Contig384 153 6e-37
3x_Contig1276 149 1e-35
3x_Contig1625 145 2e-34
>3x_Contig1671
Length = 12265
Score = 1853 bits (933), Expect = 0.0
Identities = 943/947 (99%), Gaps = 1/947 (0%)
Strand = Plus / Plus
Query: 1 acttaatatgaaagtaattcgaataacatcgtcttagaactacaggtctgtwaatggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4681 acttaatatgaaagtaattcgaataacatcgtcttagaactacaggtctgtaaatggtag 4740
Query: 61 atgaaaggatgggccttgaacctgatcttgcagccgttacccaagataatgaatgtcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 atgaaaggatgggccttgaacctgatcttgcagccgttacccaagataatgaatgtcgaa 4800
Query: 121 acattgatctgccattcaaattcggatgggctgatgattgtgttaataaatggaacagcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 acattgatctgccattcaaattcggatgggctgatgattgtgttaataaatggaacagcg 4860
Query: 181 gcaggttattgttttaccctgatatgcatctcaaactgtcagtatgtgtaatatcgaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 gcaggttattgttttaccctgatatgcatctcaaactgtcagtatgtgtaatatcgaata 4920
Query: 241 attcatacctgtcttcaacgtttatttctaattgcgggttaatgtacgggaaaacctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 attcatacctgtcttcaacgtttatttctaattgcgggttaatgtacgggaaaacctgtt 4980
Query: 301 aaataaaaaaaaaaagaaaatagagaacgagcatgttgtggcacatttgagatatttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 aaataaaaaaaaaaagaaaatagagaacgagcatgttgtggcacatttgagatatttata 5040
Query: 361 ctgtaggtctcctcagtttgagatcaacttgaaggtcattcaagcttttatctgtttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 ctgtaggtctcctcagtttgagatcaacttgaaggtcattcaagcttttatctgtttgag 5100
Query: 421 gaggtcctgggacacaaatgagaaaacagcacaataaccattcagtaaaatacgagtgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 gaggtcctgggacacaaatgagaaaacagcacaataaccattcagtaaaatacgagtgac 5160
Query: 481 aagcgacttaccgttgagctaagttgtcaaccatgactttcaacgaaagttgctgcttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 aagcgacttaccgttgagctaagttgtcaaccatgactttcaacgaaagttgctgcttta 5220
Query: 541 gctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatccacagaagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 gctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatccacagaagc 5280
Query: 601 agcatttcgatttatttttattgtcctttttgttgtccacgtgacaactattcgcatgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 agcatttcgatttatttttattgtcctttttgttgtccacgtgacaactattcgcatgta 5340
Query: 661 ttcccgttctaaagaaaaaagtcaatttgtcgatgaagaaaatcttgaaatttcgttgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 ttcccgttctaaagaaaaaagtcaatttgtcgatgaagaaaatcttgaaatttcgttgaa 5400
Query: 721 caaagttttattctctctctcttccaaaagttctttatgtgttgaggtaattaaagagct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 caaagttttattctctctctcttccaaaagttctttatgtgttgaggtaattaaagagct 5460
Query: 781 ttcatctcctcagatcaacccaattaactcaattgaaccatcataactaacataatgtct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5461 ttcatctcctcagatcaacccaattaactcaattgaaccatcataactaacataatgtct 5520
Query: 841 garattgcccaagactccaacgtttccattttttccaaaaatgaaaagaaggccagagaa 900
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 gaaattgcccaagactccaacgtttccattttttccaaaaatgaaaagaaggccagagaa 5580
Query: 901 ttgatcctaaagttgggattgaagccaat-cmaggtgtttctagagt 946
||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 5581 ttgatcctaaagttgggattgaagccaatccaaggtgtttctagagt 5627
>3x_Contig1746
Length = 26672
Score = 159 bits (80), Expect = 1e-38
Identities = 89/92 (96%)
Strand = Plus / Plus
Query: 527 aagttgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 586
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12142 aagtcgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 12201
Query: 587 cgatccacagaagcagcatttcgatttatttt 618
|||||||||||||||||||||| ||||||||
Sbjct: 12202 cgatccacagaagcagcatttctttttatttt 12233
>3x_Contig384
Length = 1678
Score = 153 bits (77), Expect = 6e-37
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 532 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1518 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 1459
Query: 592 cacagaagcagcatttc 608
|||||||||||||||||
Sbjct: 1458 cacagaagcagcatttc 1442
>3x_Contig1276
Length = 6662
Score = 149 bits (75), Expect = 1e-35
Identities = 78/79 (98%)
Strand = Plus / Minus
Query: 527 aagttgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 586
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 aagtcgctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgtt 651
Query: 587 cgatccacagaagcagcat 605
|||||||||||||||||||
Sbjct: 650 cgatccacagaagcagcat 632
>3x_Contig1625
Length = 13618
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 532 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8392 gctgctttagctcagttgggagagcgtatgactgaagttcataaggtcctgtgttcgatc 8333
Query: 592 cacagaagcagca 604
|||||||||||||
Sbjct: 8332 cacagaagcagca 8320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,802
Number of Sequences: 1807
Number of extensions: 13802
Number of successful extensions: 213
Number of sequences better than 1.0e-20: 5
length of query: 946
length of database: 10,358,551
effective HSP length: 16
effective length of query: 930
effective length of database: 10,329,639
effective search space: 9606564270
effective search space used: 9606564270
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)